EBG00000313325 - n.174G>A
Drug resistance types
65 Sensitive
4 RR-TB
42 HR-TB
12 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
51 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 1 |
| lineage2.2.1 | 15 |
| La3;lineage4 | 1 |
| La2;lineage2.2 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.1.2.1 | 3 |
| La1.2 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.7;lineage4.9 | 4 |
| lineage4.3.2.1 | 2 |
| lineage4.9 | 82 |
| La1.6;La3;lineage4.9 | 1 |
| La3;lineage4.9 | 8 |
| lineage2.2.1.1 | 2 |
| lineage4.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.9;lineage7 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage3 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage5.2 | 2 |
| lineage4 | 2 |
| La1.7.1 | 1 |
| La1.8.1 | 4 |
| lineage6.1.3 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage6 | 1 |
| La1;lineage4.9 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.8 | 1 |
| La1;lineage4.1.2 | 1 |
| La1.2.BCG | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.1.2 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| 1 | |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.1.1.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.5 | 1 |
| La1.7 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 179 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR3283028 | Other | La3;lineage4 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | ERR4769427 | Other | La1.2 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR400529 | Other | lineage3 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR1173568 | Sensitive | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | SRR1159378 | Other | lineage4.9 | None | SRR8692790 | Other | lineage4 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | SRR29772545 | MDR-TB | lineage2.2.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR3675389 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR926163 | Other | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4799378 | Sensitive | lineage4.9 | None | ERR9787362 | Sensitive | lineage6 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR6044835 | Other | lineage4.9 | None | ERR323085 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR1063896 | Sensitive | None | ERR3797067 | Other | La1.8.1 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR3283010 | Sensitive | La1.8.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR6046253 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR752229 | Other | lineage4.5 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None |
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