EBG00000313325 - n.-199G>C
Drug resistance types
106 Sensitive
1 RR-TB
126 HR-TB
27 MDR-TB
27 Pre-XDR-TB
0 XDR-TB
75 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 319 |
| lineage1.2.2.2 | 16 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.4.2 | 3 |
| lineage1.1.1.1;lineage2.2.1;lineage4.2.2 | 1 |
| lineage2.2.1;lineage2.2.2 | 3 |
| lineage2.2.1;lineage4.3.2 | 1 |
| lineage3 | 4 |
| lineage2.2.1.1 | 1 |
| lineage2.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1;lineage2.2.2;lineage4 | 1 |
| lineage3.1.2 | 3 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage2.1;lineage2.2.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 362 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3724980 | Sensitive | lineage2.2.1 | None | SRR29055833 | Other | lineage2.2.1 | None | SRR10040212 | MDR-TB | lineage2.2.1 | None | ERR13260347 | HR-TB | lineage2.2.1 | None | ERR13260326 | HR-TB | lineage2.2.1 | None | SRR21690590 | Sensitive | lineage2.2.1 | None | SRR21732606 | Sensitive | lineage2.2.1 | None | SRR28868516 | Sensitive | lineage1.2.2.2 | None | SRR22249919 | Sensitive | lineage2.2.1 | None | ERR752002 | Sensitive | lineage2.2.1;lineage4.5 | th | ERR751917 | Sensitive | lineage2.2.1 | th | SRR6153234 | HR-TB | lineage2.2.1 | ca | SRR20969672 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516102 | Sensitive | lineage1.2.2.2 | es | ERR4813310 | HR-TB | lineage2.2.1 | pe | ERR4813428 | HR-TB | lineage2.2.1 | pe | ERR4813045 | HR-TB | lineage2.2.1 | pe | ERR4813080 | HR-TB | lineage2.2.1 | pe | ERR2512984 | Sensitive | lineage1.2.2.2 | gb | ERR4820530 | Sensitive | lineage2.2.1 | gb | ERR2513687 | Sensitive | lineage1.2.2.2 | gb | ERR2514089 | Sensitive | lineage1.2.2.2 | gb | ERR2514460 | Other | lineage2.2.1 | gb | ERR2199867 | Sensitive | lineage2.2.1 | de | SRR11662298 | Other | lineage2.2.1 | None | SRR21657207 | Sensitive | lineage2.2.1 | None | ERR13260382 | HR-TB | lineage2.2.1 | None | SRR30182875 | Sensitive | lineage2.2.1 | None | ERR9119302 | Other | lineage2.2.1 | None | SRR26937127 | MDR-TB | lineage2.2.1 | None | SRR10828197 | Sensitive | lineage2.2.1 | None | ERR13260275 | MDR-TB | lineage2.2.1 | None | ERR13260324 | HR-TB | lineage2.2.1 | None | SRR5065208 | Sensitive | lineage2.2.1 | vn | SRR29051577 | Other | lineage2.2.1 | None | SRR11662698 | MDR-TB | lineage2.2.1 | None | SRR5065209 | HR-TB | lineage2.2.1 | vn | ERR13260333 | HR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR13260323 | MDR-TB | lineage2.2.1 | None | ERR13260349 | HR-TB | lineage2.2.1;lineage4 | None | SRR5073830 | Other | lineage2.2.1 | vn | SRR5073608 | Other | lineage2.2.1 | vn | SRR5073522 | Other | lineage2.2.1 | vn | SRR5074062 | Sensitive | lineage2.2.1 | vn | SRR29017296 | Sensitive | lineage2.2.1 | None | ERR13260360 | HR-TB | lineage2.2.1 | None | SRR14519729 | Sensitive | lineage2.2.1 | None | SRR20969763 | Pre-XDR-TB | lineage2.2.1 | None | SRR26399844 | Sensitive | lineage2.2.1 | None | SRR24083625 | Sensitive | lineage2.2.1 | None | ERR11081716 | Sensitive | lineage2.2.1 | None | SRR22251636 | Sensitive | lineage2.2.1 | None | SRR11662482 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969503 | Sensitive | lineage2.2.1 | None | SRR29385289 | MDR-TB | lineage2.2.1 | None | SRR25206886 | Sensitive | lineage4.4.2 | None | ERR13260355 | HR-TB | lineage2.2.1 | None | ERR13260520 | HR-TB | lineage2.2.1 | None | ERR4828144 | HR-TB | lineage2.2.1 | None | ERR13260217 | HR-TB | lineage2.2.1 | None | SRR21732293 | Other | lineage2.2.1 | None | ERR13260262 | HR-TB | lineage2.2.1 | None | ERR13260350 | HR-TB | lineage2.2.1 | None | SRR29097011 | Sensitive | lineage2.2.1 | None | ERR13260274 | HR-TB | lineage2.2.1 | None | SRR28170827 | Other | lineage2.2.1 | None | ERR13260368 | HR-TB | lineage2.2.1 | None | ERR4813631 | HR-TB | lineage2.2.1 | None | SRR10040197 | Pre-XDR-TB | lineage2.2.1 | None | SRR28868783 | HR-TB | lineage2.2.1 | None | ERR13260336 | HR-TB | lineage2.2.1 | None | SRR27450493 | Other | lineage2.2.1 | None | ERR13260296 | HR-TB | lineage2.2.1 | None | ERR12328154 | Other | lineage1.1.1.1;lineage2.2.1;lineage4.2.2 | None | SRR20969651 | Pre-XDR-TB | lineage2.2.1 | None | SRR29056227 | Other | lineage2.2.1 | None | SRR21710676 | Sensitive | lineage2.2.1 | None | SRR29385407 | HR-TB | lineage2.2.1 | None | ERR13260251 | HR-TB | lineage2.2.1 | None | ERR13260283 | HR-TB | lineage2.2.1 | None | ERR13291816 | Other | lineage2.2.1 | None | SRR20969796 | Sensitive | lineage2.2.1 | None | SRR20969693 | Sensitive | lineage2.2.1 | None | ERR13260514 | HR-TB | lineage2.2.1 | None | ERR13260361 | HR-TB | lineage2.2.1 | None | ERR13194021 | Sensitive | lineage2.2.1 | None | ERR13260289 | HR-TB | lineage2.2.1 | None | ERR13260506 | MDR-TB | lineage2.2.1 | None | ERR13439911 | HR-TB | lineage2.2.1 | None | SRR28859849 | Other | lineage2.2.1 | None | SRR29051408 | HR-TB | lineage2.2.1 | None | SRR20969668 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260606 | HR-TB | lineage2.2.1 | None | SRR21675642 | Other | lineage2.2.1 | None | ERR13260297 | HR-TB | lineage2.2.1 | None | SRR28858521 | MDR-TB | lineage2.2.1 | None | ERR2843495 | Other | lineage2.2.1;lineage2.2.2 | None | ERR2843496 | Other | lineage2.2.1 | None | ERR13260311 | HR-TB | lineage2.2.1;lineage4.3.2 | None | SRR22251610 | Sensitive | lineage2.2.1 | None | ERR13260353 | MDR-TB | lineage2.2.1 | None | SRR18914233 | Other | lineage2.2.1 | None | SRR20969479 | Other | lineage2.2.1 | None | ERR13261674 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR13260584 | HR-TB | lineage2.2.1 | None | ERR2199866 | Sensitive | lineage2.2.1 | None | SRR26399334 | Other | lineage2.2.1 | None | ERR13260608 | HR-TB | lineage2.2.1 | None | SRR26399774 | Other | lineage2.2.1 | None | ERR752203 | Sensitive | lineage2.2.1 | th | SRR22251866 | MDR-TB | lineage2.2.1 | None | SRR22251825 | HR-TB | lineage2.2.1 | None | ERR718417 | Sensitive | lineage2.2.1 | th | ERR718416 | Sensitive | lineage2.2.1 | th | ERR751787 | HR-TB | lineage2.2.1 | th | SRR28045138 | HR-TB | lineage2.2.1 | None | ERR7911172 | MDR-TB | lineage2.2.1 | vn | ERR4813652 | HR-TB | lineage2.2.1 | None | SRR5535713 | HR-TB | lineage2.2.1 | None | SRR26399262 | HR-TB | lineage2.2.1 | None | SRR28045868 | MDR-TB | lineage2.2.1 | None | ERR4831924 | HR-TB | lineage2.2.1 | vn | ERR4831962 | HR-TB | lineage2.2.1 | vn | ERR4830431 | Other | lineage2.2.1 | vn | ERR4830302 | Sensitive | lineage2.2.1 | vn | ERR4830206 | Other | lineage2.2.1 | vn | ERR4828619 | Other | lineage2.2.1 | vn | ERR4828617 | Other | lineage2.2.1 | vn | ERR4828622 | HR-TB | lineage2.2.1 | vn | ERR4828743 | Sensitive | lineage2.2.1 | vn | ERR4828746 | Sensitive | lineage2.2.1 | vn | ERR4828157 | HR-TB | lineage2.2.1 | vn | ERR4828383 | Other | lineage2.2.1;lineage2.2.2 | vn | ERR4828472 | Other | lineage2.2.1 | vn | SRR5709855 | Sensitive | lineage2.2.1 | th | SRR5709791 | Sensitive | lineage2.2.1 | th | SRR5709766 | Sensitive | lineage2.2.1 | th | SRR5709869 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709795 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709847 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709788 | Sensitive | lineage2.2.1 | th | SRR5709761 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709891 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709757 | Pre-XDR-TB | lineage2.2.1 | th | ERR171163 | HR-TB | lineage2.2.1 | th | SRR7070070 | Other | lineage3 | None | SAMN02599052 | Sensitive | lineage2.2.1 | None | ERR4813669 | HR-TB | lineage2.2.1 | None | SRR15316542 | Sensitive | lineage2.2.1 | None | ERR13260255 | HR-TB | lineage2.2.1 | None | ERR13260583 | HR-TB | lineage2.2.1 | None | ERR13261700 | HR-TB | lineage2.2.1 | None | ERR234245 | Sensitive | lineage2.2.1 | None | SRR5065688 | Sensitive | lineage2.2.1 | vn | ERR13292025 | Sensitive | lineage2.2.1 | None | SRR5065438 | Sensitive | lineage2.2.1 | vn | SRR5067469 | Sensitive | lineage2.2.1 | vn | SRR3724745 | Other | lineage2.2.1 | None | SRR5067658 | Other | lineage2.2.1 | vn | SRR7070379 | Other | lineage2.2.1 | None | SRR5073903 | Sensitive | lineage2.2.1 | vn | SRR5073581 | Other | lineage2.2.1.1 | vn | SRR5073760 | Sensitive | lineage2.2.1 | vn | ERR4813593 | HR-TB | lineage2.2.1 | None | SRR28868803 | Other | lineage2.2.1 | None | SRR26112730 | Sensitive | lineage2.2.1 | None | ERR4811469 | Sensitive | lineage4.4.2 | cn | ERR3276062 | Sensitive | lineage2.2.1 | nl | ERR13292210 | Sensitive | lineage2.2.1 | None | SRR22249604 | RR-TB | lineage2.2.1 | None | SRR1175107 | Sensitive | lineage2.2.1 | None | ERR7902689 | Sensitive | lineage1.2.2.2 | None | SRR16057883 | Sensitive | lineage1.2.2.2 | None | ERR10465887 | Sensitive | lineage2.2.1 | None | SRR10809021 | HR-TB | lineage2.2.1;lineage4.4.1.1 | None | SRR10828180 | Pre-XDR-TB | lineage2.2.1 | None | SRR5073763 | HR-TB | lineage2.2.1 | None | SRR26937041 | MDR-TB | lineage2.2.1 | None | SRR26399949 | Other | lineage2.2.1 | None | SRR5073986 | Sensitive | lineage2.2.1 | None | SRR8217903 | Sensitive | lineage2.2.1 | None | ERR9119283 | Sensitive | lineage2.2.1 | None | ERR11051011 | HR-TB | lineage4.1.2.1 | None | SRR26400058 | HR-TB | lineage2.2.1 | None | SRR18910202 | Sensitive | lineage2.2.1 | None | SRR28868703 | Other | lineage2.2.1 | None | ERR9119205 | Other | lineage2.2.1 | None | SRR21661648 | Other | lineage2.2.1 | None | ERR13260299 | HR-TB | lineage2.2.1 | None | SRR1172832 | Sensitive | lineage2.2.1 | None | SRR10040339 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261701 | HR-TB | lineage2.2.1 | None | SRR28868468 | Other | lineage2.2.1 | None | SRR29051357 | HR-TB | lineage2.2.1 | None | ERR13260307 | HR-TB | lineage2.2.1 | None | ERR13260384 | HR-TB | lineage2.2.1 | None | SRR29385283 | MDR-TB | lineage2.2.1;lineage2.2.2;lineage4 | None | SRR29096165 | Sensitive | lineage2.2.1 | None | ERR13260309 | HR-TB | lineage2.2.1 | None | SRR21732556 | Other | lineage2.2.1 | None | ERR13260586 | HR-TB | lineage2.2.1 | None | ERR13260605 | HR-TB | lineage2.2.1 | None | ERR13260609 | HR-TB | lineage2.2.1 | None | ERR13260363 | MDR-TB | lineage2.2.1 | None | SRR29017490 | HR-TB | lineage2.2.1 | None | SRR20969630 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260327 | HR-TB | lineage2.2.1 | None | ERR13260367 | HR-TB | lineage2.2.1 | None | SRR29055384 | Other | lineage2.2.1 | None | ERR13289793 | Sensitive | lineage3.1.2 | None | SRR29050932 | Sensitive | lineage2.2.1 | None | ERR13261655 | HR-TB | lineage2.2.1 | None | ERR4799460 | Pre-XDR-TB | lineage2.2.1 | in | ERR13291086 | Sensitive | lineage2.2.1 | None | ERR13260338 | HR-TB | lineage2.2.1 | None | ERR13260359 | HR-TB | lineage2.2.1 | None | ERR13261869 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR6045542 | Other | lineage3 | None | SRR20969812 | Other | lineage2.2.1 | None | ERR13261690 | HR-TB | lineage2.2.1 | None | SRR26112535 | Other | lineage2.2.1 | None | ERR13260300 | HR-TB | lineage2.2.1 | None | ERR13260328 | HR-TB | lineage2.2.1 | None | SRR16370658 | MDR-TB | lineage2.2.1 | None | ERR13260320 | HR-TB | lineage2.2.1 | None | ERR13260285 | HR-TB | lineage2.2.1 | None | ERR13260582 | HR-TB | lineage2.2.1 | None | SRR18003011 | Other | lineage2.2.1 | None | ERR4798231 | HR-TB | lineage4.1.2.1 | in | SRR30182718 | Sensitive | lineage2.2.1 | None | SRR21277508 | Sensitive | lineage2.2.1 | None | ERR13260263 | HR-TB | lineage2.2.1 | None | SRR29056232 | HR-TB | lineage2.2.1 | None | ERR13261691 | HR-TB | lineage2.2.1 | None | ERR13260292 | HR-TB | lineage2.2.1 | None | ERR13260657 | MDR-TB | lineage2.2.1 | None | SRR26112631 | Other | lineage2.2.1 | None | SRR7069712 | Sensitive | lineage1.2.2.2 | None | SRR18914227 | Other | lineage2.2.1 | None | ERR13260507 | HR-TB | lineage2.2.1 | None | ERR13260600 | HR-TB | lineage2.2.1 | None | SRR22251466 | Sensitive | lineage2.2.1 | None | SRR29096434 | Sensitive | lineage2.2.1 | None | SRR29096785 | Sensitive | lineage2.2.1 | None | ERR13260618 | HR-TB | lineage2.2.1 | None | SRR21733081 | Sensitive | lineage2.2.1 | None | SRR29050687 | Other | lineage2.2.1 | None | ERR13260261 | HR-TB | lineage2.2.1 | None | SRR16370554 | MDR-TB | lineage2.2.1 | None | SRR29051446 | Other | lineage2.2.1 | None | SRR29441025 | Other | lineage2.2.1 | None | SRR28858619 | Other | lineage2.2.1 | None | ERR9125751 | Sensitive | lineage1.2.2.2 | None | SRR22249401 | Sensitive | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR22251621 | Sensitive | lineage2.2.1 | None | ERR13260627 | HR-TB | lineage2.2.1 | None | SRR5535715 | HR-TB | lineage2.2.1 | None | ERR13260358 | HR-TB | lineage2.2.1 | None | SRR29016926 | Other | lineage2.2.1 | None | SRR29052918 | Other | lineage2.2.1 | None | ERR13260216 | HR-TB | lineage2.2.1 | None | ERR4195860 | Sensitive | lineage1.2.2.2 | None | ERR13260273 | HR-TB | lineage2.2.1 | None | SRR28868544 | Other | lineage2.2.1 | None | SRR28868561 | Other | lineage2.2.1 | None | ERR13260332 | HR-TB | lineage2.2.1 | None | SRR23316636 | HR-TB | lineage2.2.1 | None | ERR13260629 | HR-TB | lineage2.2.1 | None | SRR21690904 | HR-TB | lineage2.2.1 | None | ERR13260268 | HR-TB | lineage2.2.1 | None | ERR13260351 | HR-TB | lineage2.2.1 | None | ERR4828331 | Other | lineage2.2.1 | None | ERR4813665 | HR-TB | lineage2.2.1 | None | SRR10341351 | MDR-TB | lineage2.1;lineage2.2.1 | None | SRR10828181 | MDR-TB | lineage2.1;lineage2.2.1 | None | ERR031467 | Sensitive | lineage2.2.1 | None | SRR15316434 | Sensitive | lineage2.2.1 | None | ERR718317 | Other | lineage2.2.1 | th | ERR718200 | Sensitive | lineage2.2.1 | th | ERR718372 | HR-TB | lineage2.2.1 | th | SRR28045834 | MDR-TB | lineage2.2.1 | None | SRR22251737 | Sensitive | lineage1.2.2.2 | None | ERR752231 | Sensitive | lineage2.2.1 | th | ERR7911185 | MDR-TB | lineage2.2.1 | vn | ERR7911321 | MDR-TB | lineage2.2.1 | vn | ERR7911492 | MDR-TB | lineage2.2.1 | vn | SRR25207307 | Pre-XDR-TB | lineage2.2.1 | None | SRR3724820 | Sensitive | lineage2.2.1 | None | ERR4828396 | Other | lineage2.2.1 | vn | SRR6045907 | Sensitive | lineage3.1.2 | gb | SRR6045108 | Other | lineage3 | gb | SRR16370356 | HR-TB | lineage2.2.1 | None | SRR8217922 | Other | lineage2.2.1 | None | ERR11043966 | Other | lineage2.2.1 | None | ERR12328190 | Other | lineage2.2.1 | None | SRR12072604 | Pre-XDR-TB | lineage2.2.1 | None | SRR5065347 | Other | lineage2.2.1 | vn | SRR22251671 | HR-TB | lineage2.2.1 | None | SRR5065521 | Sensitive | lineage2.2.1 | vn | SRR5065362 | Other | lineage2.2.1 | vn | SRR11662445 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260601 | HR-TB | lineage2.2.1 | None | SRR21277095 | Sensitive | lineage4.4.2 | None | SRR22249839 | Sensitive | lineage2.2.1 | None | SRR5067562 | Sensitive | lineage2.2.1 | vn | SRR5073717 | Sensitive | lineage2.2.1 | vn | SRR26399913 | Sensitive | lineage2.2.1 | None | SRR20969943 | HR-TB | lineage2.2.1 | None | ERR9121494 | Sensitive | lineage1.2.2.2 | None | ERR10465947 | Sensitive | lineage2.2.1 | None | SRR22249769 | Sensitive | lineage2.2.1 | None | SRR24799253 | Sensitive | lineage2.2.1 | None | ERR4812808 | HR-TB | lineage2.2.1 | None | SRR6480576 | HR-TB | lineage2.2.1 | None | ERR4799623 | Sensitive | lineage3.1.2 | in | ERR13261672 | HR-TB | lineage2.2.1 | None | ERR13260377 | HR-TB | lineage2.2.1 | None | SRR22251946 | Sensitive | lineage2.2.1 | None | ERR13261689 | HR-TB | lineage2.2.1 | None | ERR4813690 | HR-TB | lineage2.2.1 | None | ERR11050534 | Other | lineage1.2.2.2 | None | ERR13261685 | HR-TB | lineage2.2.1 | None | SRR21685362 | Other | lineage2.2.1 | None | ERR13260383 | HR-TB | lineage2.2.1 | None | SRR22249534 | Sensitive | lineage1.2.2.2 | None | ERR13260346 | HR-TB | lineage2.2.1 | None | SRR10040510 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260372 | HR-TB | lineage2.2.1 | None | SRR10040445 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260620 | HR-TB | lineage2.2.1 | None | ERR13292498 | Other | lineage2.2.1 | None | DRR261074 | Other | lineage2.2.1 | None | SRR28858433 | Sensitive | lineage1.2.2.2 | None | SRR20969591 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261870 | HR-TB | lineage2.2.1 | None | ERR13260622 | HR-TB | lineage2.2.1 | None | ERR13292493 | Other | lineage2.2.1 | None | SRR10040393 | Pre-XDR-TB | lineage2.2.1 | None | SRR28868368 | Sensitive | lineage2.2.1 | None | ERR13260331 | HR-TB | lineage2.2.1 | None | ERR13260370 | HR-TB | lineage2.2.1 | None | SRR11662292 | MDR-TB | lineage2.2.1 | None | ERR13260264 | HR-TB | lineage2.2.1 | None | SRR26399335 | Other | lineage2.2.1 | None | SRR21722236 | Other | lineage2.2.1 | None | ERR13260549 | HR-TB | lineage2.2.1 | None | ERR13260325 | HR-TB | lineage2.2.1 | None | SRR10040443 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260612 | HR-TB | lineage2.2.1 | None | SRR15014788 | Sensitive | lineage2.2.1 | None | SRR20969398 | Sensitive | lineage2.2.1 | None | ERR13290035 | Other | lineage3 | None | SRR29440892 | Other | lineage2.2.1 | None | ERR11050198 | Sensitive | lineage1.2.2.2 | None | SRR29050796 | Other | lineage2.2.1;lineage2.2.2 | None | SRR20969457 | Pre-XDR-TB | lineage2.2.1 | None | ERR171162 | HR-TB | lineage2.2.1 | th | SRR10040354 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231453 | Sensitive | lineage2.2.1 | None | ERR13260369 | HR-TB | lineage2.2.1 | None | SRR10040463 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
